IGVFFI3186VVTU

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2193DIJK(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP012_G5_P060_L007_I2

md5sum

aa4b2ce7792d16779e5a3dd1fcb30189

Content MD5sum

25d3b0765fbed728a01e0bf97d337d6c

File Size

359 MB

Submitted File Name

Multiome_RNA_RP012_G5_L005_P060_S37_L007_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

53322411

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0752KTLR

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) substantia nigra tissue; ... and 14 more samples