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INDEXED
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SequenceFile
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IGVFFI3186UKAB
IGVFFI3186UKAB
released
validated
Json view
File Set
IGVFDS7549ZYDK
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 7392
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7392_R1
md5sum
964c572d8495a84514a0f796456387da
Content MD5sum
053f7ae9fe871b700d421031e3ccf1bd
File Size
7.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1952_L2_SS-PKR-502_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
7392
Flowcell ID
22KFLYLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
184144825
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6577YGTD
Tissue
left cerebral cortex
Mus musculus CASTJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 502)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7670TCZV
yaml
seqspec
seqspec of IGVFFI3186UKAB, IGVFFI0451EXNB
Jason Buenrostro, Broad
1.3 KB
validated