IGVFFI3175HOGG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3473OBBZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP014_G8_P062_L007_R2

md5sum

16288f6c52249b42a8a1d155f2a11f90

Content MD5sum

12a490ecc007a7d8742e95908ec0347f

File Size

2.3 GB

Submitted File Name

Multiome_RNA_RP014_G8_L008_P062_S36_L007_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

55196953

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7659CCOT

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples