Home

IGVFFI3170LHCI

released
validated
File Set
IGVFDS4878TLQK(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 1604
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1604_R2
buenrostro-bernstein:SS-LS_1604_R2
md5sum
4591f390b67096fc392dec290afdb4c3
Content MD5sum
5b808ab414d21c461487dab3efa48c71
File Size
2.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1101_L3_SS-PKR-4_SS-V1-1st-THIRD_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1604
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
56728134

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (26 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad