IGVFFI3167GGPC

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2273GPNU(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP029_G7_P078_L007_I1

md5sum

ac2d6428c2b0095d5fc7f1b96fbbe500

Content MD5sum

e873e308860f53fd40a1135fa04f3026

File Size

1.2 GB

Submitted File Name

Multiome_RNA_RP029_G7_L007_P078_S71_L007_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

156708624

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3839YDOW

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) posterior cingulate gyrus tissue; ... and 6 more samples