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INDEXED
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SequenceFile
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IGVFFI3146KWVN
IGVFFI3146KWVN
released
validated
Json view
File Set
IGVFDS5607LMEW
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4347
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4347_R1
md5sum
91cb35c21fd9091c948489506d2cf152
Content MD5sum
f68374f05c8fab784bdd38b67028bfd0
File Size
3.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-555_L1_SS-PKR-207_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4347
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
53660583
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9310VRCN
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 207)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8172NTED
yaml
seqspec
seqspec of IGVFFI3146KWVN, IGVFFI6320FOXL, IGVFFI0027VQHK
Jason Buenrostro, Broad
1.3 KB
validated