IGVFFI3137WZTQ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7327OCJZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X034_G1_P034_L002_I2

md5sum

5829d1e589131cc516fa8c3561e29619

Content MD5sum

56b44c56758c5c570396e22f1a7109f0

File Size

1.5 GB

Submitted File Name

Multiome_RNA_X034_G1_L001_P034_S25_L002_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H2WFTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

232191052

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8142OKXB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 80 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 80 years) cerebellar cortex tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; ... and 10 more samples