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IGVFFI3119TNSE

released
validated
File Set
IGVFDS7747XDUI(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 264
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2101_R2
bradley-bernstein:SS-LS_264_R2
buenrostro-bernstein:SS-LS_2101_R2
buenrostro-bernstein:SS-LS_264_R2
md5sum
b79dc9187652b85423aaa7655c8c79cc
Content MD5sum
f054ad0eb089d5b19f729c94574dafa2
File Size
741 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-183_L2_SS-PKR-132_SS-V1-RIGHT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
264
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
14442366

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
6.1 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
845 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI0137ERGS, IGVFFI3119TNSE
Jason Buenrostro, Broad
1.2 KB
validated