IGVFFI3114GZXL

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8219ZWGY(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X042_G2_P044_L006_I2

md5sum

540d02d8551aeba0d67754171ba528f5

Content MD5sum

4eac7665ea2d2aafd61c90defff43e44

File Size

422 MB

Submitted File Name

Multiome_RNA_X042_G2_L002_P044_S20_L006_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

222YMLLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

66322510

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9775XYEX

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples