IGVFFI3111OZMK

{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI3111OZMK/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI3111OZMK",
    "assay_titles": [],
    "audit": {},
    "award": {
        "@id": "/awards/HG011966/",
        "component": "functional characterization"
    },
    "content_md5sum": "07ff48678b6d8c0175e42babb8e97924",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2024-10-29T09:18:35.146409+00:00",
    "description": "Library barcode reads of oligo assignment",
    "externally_hosted": false,
    "file_format": "fastq",
    "file_set": {
        "@id": "/construct-library-sets/IGVFDS9668QVZD/",
        "accession": "IGVFDS9668QVZD",
        "file_set_type": "reporter library",
        "status": "released",
        "summary": "reporter library targeting histone modifications, transcription start sites genome-wide associated with autism spectrum disorder"
    },
    "file_size": 812626260,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI3111OZMK/@@download/IGVFFI3111OZMK.fastq.gz",
    "illumina_read_type": "R2",
    "input_file_for": [
        "/tabular-files/IGVFFI4651HMEA/",
        "/tabular-files/IGVFFI0922GLFQ/"
    ],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/nadav-ahituv/",
        "title": "Nadav Ahituv, UCSF"
    },
    "loci_list_for": [],
    "maximum_read_length": 15,
    "md5sum": "d274c855027beb3836feeda884fb806e",
    "mean_read_length": 15,
    "minimum_read_length": 15,
    "read_count": 44633047,
    "release_timestamp": "2025-01-09T20:34:27.391439+00:00",
    "s3_uri": "s3://igvf-files/2024/10/29/84e42604-9c0a-4962-a6e4-ba71dce67ce3/IGVFFI3111OZMK.fastq.gz",
    "schema_version": "14",
    "seqspecs": [
        "/configuration-files/IGVFFI3317RVVD/"
    ],
    "sequencing_kit": "NextSeq 500 Mid Output v2 Kit",
    "sequencing_platform": {
        "@id": "/platform-terms/EFO_0009173/",
        "status": "released",
        "term_name": "Illumina NextSeq 500"
    },
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/3ad3479d-753b-4293-9c09-c0dcabfd0ddb/",
        "title": "Max Schubach"
    },
    "submitted_file_name": "\"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/ASD_nadav/assignment/Steph-assoc_S4_R2_001.fastq.gz\"",
    "submitter_comment": "seqrun1",
    "summary": "R2 reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "84e42604-9c0a-4962-a6e4-ba71dce67ce3"
}