Home

IGVFFI3105NECM

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS8894MIXR(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_X042_G6_P044_L006_R1
md5sum
1ca5730917fe1c64894bfef9cd9a69f8
Content MD5sum
61888eb7a02ca0af41a6e25b0b79eee9
File Size
1.3 GB
Submitted File Name
Multiome_RNA_X042_G6_L006_P044_S24_L006_R1_001.fastq.gz
Checkfiles Version
v20

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
222YMLLT3
Lane
6
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
28
Read Count
65869545

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 79 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF