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INDEXED
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SequenceFile
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IGVFFI3098NGVX
IGVFFI3098NGVX
released
validated
Json view
File Set
IGVFDS0901BUZQ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8682
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8682_R1
md5sum
c9c15f5f7ad21d0721c8a195523625f0
Content MD5sum
ec62185b71d75799bdf21917732c9961
File Size
839 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2320_L3_SS-PKR-184_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8682
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
18488190
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2147DYYV
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 184)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7207UFGC
yaml
seqspec
seqspec of IGVFFI3098NGVX, IGVFFI4003UADL, IGVFFI4664AHXN
Jason Buenrostro, Broad
1.3 KB
validated