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INDEXED
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SequenceFile
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IGVFFI3063EPJI
IGVFFI3063EPJI
released
validated
Json view
File Set
IGVFDS7606ECSX
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C39_day14_L2_R1
md5sum
c216f44f3f1d9254703e7957e1ba2661
Content MD5sum
41075f440bdaa3dcd9f54d6b9f343dc3
File Size
2.9 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl47/20231005-3C39D14-Pos1-B04_S14_L002_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
2
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
148.58
Read Count
40480763
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3325VZXM
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 14 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA