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INDEXED
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SequenceFile
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IGVFFI3045PSVF
IGVFFI3045PSVF
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1790XLZR
(scATAC-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
maya-kasowski:Scale_scATAC_lane4_R1
md5sum
f2a86f211fa543682ba665323c78284e
Content MD5sum
3567e3f8185b347f52ee2abd19abf50f
File Size
31 GB
Submitted File Name
/users/shouvikm/data/Scale/SCALE_leukemia_01202023/fastqs_after_scATAC_Scale_pipeline/S701-S706/S704/S704P_S4_L003_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Maya Kasowski, Stanford
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
85.67
Read Count
490804514
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1625LLXE
MultiplexedSample
bone marrow
multiplexed sample: Homo sapiens bone marrow cell; Homo sapiens (female) bone marrow cell; ... and 21 more samples