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INDEXED
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SequenceFile
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IGVFFI3029GFER
IGVFFI3029GFER
released
validated
Json view
File Set
IGVFDS0228CLFT
(reporter library targeting random selections genome-wide)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P012-R1
md5sum
529ea1e8dc61eadb1f2a6042441b03b3
Content MD5sum
52ca2c0e3342a595010d429d3e1f91ff
File Size
7.1 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool12.R1.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKFM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R1
Average Read Length
301
Read Count
49576560
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2691XADJ
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
7.5 GB
validated
IGVFFI8858NPQE
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
7.8 GB
validated