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INDEXED
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SequenceFile
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IGVFFI3024GJLG
IGVFFI3024GJLG
released
validated
Json view
File Set
IGVFDS6090HGQV
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4370
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4370_R1
md5sum
699486fa2a4a3c117ae2ffeceee01beb
Content MD5sum
81e5bf397bd8203155d47795b21701f0
File Size
2.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-559_L2_SS-PKR-207_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4370
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
43829239
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9723NFKQ
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 207)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1542JRTD
yaml
seqspec
seqspec of IGVFFI3024GJLG, IGVFFI6884FLAH, IGVFFI2804WFHE
Jason Buenrostro, Broad
1.3 KB
validated