IGVFFI3023JKLG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1310UDQP(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP008_G6_P058_L003_I1

md5sum

2e84506ccbc0604968bca2d68a636bbb

Content MD5sum

a207206316641fad6e243d35095e8a63

File Size

385 MB

Submitted File Name

Multiome_RNA_RP008_G6_L006_P058_S6_L003_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

61173271

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7190BHUX

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 69 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 79 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples