IGVFFI3015MCZF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7806UOQI(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP011_G2_P060_L007_I2

md5sum

0e6a7c20a6181ddb5772381c710410f3

Content MD5sum

fad785691653302ca10e08fc28b733d1

File Size

453 MB

Submitted File Name

Multiome_RNA_RP011_G2_L007_P060_S31_L007_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

69402908

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9347ZBKI

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 53 years) middle temporal gyrus tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 14 more samples