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IGVFFI3012DHYF

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1493FGGS(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X005_G8_P003_L004_R1
md5sum
6cd010bc99d5a30f697cf2c6f1f885eb
Content MD5sum
af512c024992faab4bfcc193d2ac23bd
File Size
5.7 GB
Submitted File Name
Multiome_ATAC_X005_G8_L008_P003_S26_L004_R1_001.fastq.gz
Checkfiles Version
v20

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
H5TH7DSX5
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
180261348

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 87 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with cerebral amyloid angiopathy; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF