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IGVFFI3005SRBJ

released
validated
File Set
IGVFDS1836ZBLJ(quantification DNA barcode sequencing for lentiMPRA integrating a reporter library targeting candidate cis-regulatory elements genome-wide)
Summary
R3 reads from sequencing run 6
File Format
fastq
Content Type
reads
md5sum
ef7c382da7acc68937155bbed3119f9f
Content MD5sum
8f6b14826d5c9a10c24296e38aaa98d7
File Size
414 MB
Submitted File Name
"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/proximalPromotor/count/HEK293T/run6/run6_dna-3_S3_R3_001.fastq.gz"
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
seqrun6
Attribution
Nadav Ahituv, UCSF

Sequencing Details

Sequencing Platform
Illumina NextSeq 500
Sequencing Run
6
Sequencing Kit
NextSeq 500 High Output v2 Kit
Illumina Read Type
R3
Average Read Length
15
Read Count
24824092

Files Derived From This File

3 items
tsv
reporter experiment
GRCh38 reporter experiment
Nadav Ahituv, UCSF
19 MB
validated
tsv
reporter experiment barcode
GRCh38 reporter experiment barcode
Nadav Ahituv, UCSF
216 MB
validated
tsv
reporter experiment
GRCh38 reporter experiment
Nadav Ahituv, UCSF
18 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI0249XPLJ, IGVFFI1753NTVQ, IGVFFI9700VHVR, IGVFFI8956WSJF, IGVFFI1645IYON, IGVFFI3870FNDY, IGVFFI8165INFB, IGVFFI0980NDTE, IGVFFI3005SRBJ
Nadav Ahituv, UCSF
1.6 KB
validation exempted