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INDEXED
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SequenceFile
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IGVFFI3005GWOJ
IGVFFI3005GWOJ
released
validated
Json view
File Set
IGVFDS3074DPDQ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 8423
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8423_R1
md5sum
10cebb012b3d65b7576354a6844b584e
Content MD5sum
6c0fac9cc3b90b7095aa3d5a6487e083
File Size
4.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2243_L3_SS-PKR-604_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8423
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
108166096
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7652DCKY
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 604)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2644ZPAD
yaml
seqspec
seqspec of IGVFFI3005GWOJ, IGVFFI9047CYME
Jason Buenrostro, Broad
1.3 KB
validated