Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI3003JSMR
IGVFFI3003JSMR
released
validated
Json view
File Set
IGVFDS4591TQQX
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 813
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_813_R1
md5sum
1d782cd9bde998fad5b6e3af863055af
Content MD5sum
49672ee061630491d040af1635c2982e
File Size
1.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-988_L7_SS-PKR-200_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
813
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
35905423
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0557AGSJ
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 200)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8300CEKX
yaml
seqspec
seqspec of IGVFFI3003JSMR, IGVFFI5939LMLY, IGVFFI0026UNFW
Jason Buenrostro, Broad
1.3 KB
validated