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INDEXED
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SequenceFile
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IGVFFI2998VMEF
IGVFFI2998VMEF
released
validated
Json view
File Set
IGVFDS1872UZFL
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8481
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8481_R1
md5sum
5eb0b54d595289afbfde080185a79601
Content MD5sum
fa6881adc7b456f7d4e2a861a21d2303
File Size
825 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2311_L1_SS-PKR-182_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8481
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
18743140
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4232UUYV
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 182)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0853SIGB
yaml
seqspec
seqspec of IGVFFI2998VMEF, IGVFFI6372AOOJ, IGVFFI2786SQSA
Jason Buenrostro, Broad
1.3 KB
validated