IGVFFI2996GNNA

{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI2996GNNA/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI2996GNNA",
    "aliases": [
        "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-FACS_Input-PCRrep1_R2"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released sequence file [IGVFFI2996GNNA](/sequence-files/IGVFFI2996GNNA/) has in progress subobject auxiliary set [IGVFDS1697BVWV](/auxiliary-sets/IGVFDS1697BVWV/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/sequence-files/IGVFFI2996GNNA/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "ed57b170ffe7b7239e508ca8925ba0ac",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2023-12-05T20:37:10.833197+00:00",
    "file_format": "fastq",
    "file_set": "/auxiliary-sets/IGVFDS1697BVWV/",
    "file_size": 6067895,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI2996GNNA/@@download/IGVFFI2996GNNA.fastq.gz",
    "illumina_read_type": "R2",
    "index": "GCACACGA:TTGT",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 150,
    "md5sum": "d9c6387a092bab1f02c27e27848b563f",
    "mean_read_length": 150,
    "minimum_read_length": 150,
    "read_count": 165229,
    "release_timestamp": "2023-12-20T23:54:12.246297+00:00",
    "s3_uri": "s3://igvf-files/2023/12/05/f36fe852-4538-4b77-8b24-5900c1de5b93/IGVFFI2996GNNA.fastq.gz",
    "schema_version": "14",
    "seqspecs": [],
    "sequencing_platform": "/platform-terms/EFO_0008566/",
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
        "title": "Michael Montgomery"
    },
    "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinAll-PCRrep1_S387_R2_001.fastq.gz",
    "summary": "R2 reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "f36fe852-4538-4b77-8b24-5900c1de5b93"
}