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INDEXED
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SequenceFile
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IGVFFI2990RHQV
IGVFFI2990RHQV
released
validated
Json view
File Set
IGVFDS6623PZMD
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8346
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8346_R1
md5sum
c1d52850b077449d13c25ee7d55bf6f5
Content MD5sum
79648385e909972e57e2e7efd4bc1bbe
File Size
994 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2232_L8_SS-PKR-574_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8346
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
24633538
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7444XSMN
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 574)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9591TFXX
yaml
seqspec
seqspec of IGVFFI2990RHQV, IGVFFI3874PDTF
Jason Buenrostro, Broad
1.3 KB
validated