IGVFFI2989ZFGQ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0147IIPP(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP002_G4_P052_L003_R1

md5sum

96e6c901ea426d0d2e6c674f6f016205

Content MD5sum

3b008f00ed07f7e94a96702141118e70

File Size

809 MB

Submitted File Name

Multiome_RNA_RP002_G4_L004_P052_S12_L003_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

40292746

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6197WJXN

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples