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IGVFFI2989ICSG

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7859EYQR(single-nucleus RNA sequencing assay (10x multiome))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
harinder-singh:donor1_Bcell_multiome_GEX_NGS_Day0_2_L003_I1_corrected
md5sum
4c8d4f5116aec2a7a3fa35d221921f64
Content MD5sum
647cacd1448956be8895cf97e910df47
File Size
385 MB
Submitted File Name
/ix/djishnu/peasena/primary_multiome/donor1_upmc/fastqs/scRNA/NP002_01_120222_Singh_Multiome_GEX_LAF4451A11_S10_L003_I1_001.fastq.gz
Checkfiles Version
v19
Attribution
Harinder Singh, University of Pittsburgh

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
10
Read Count
51188449

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 2 days

Files Derived From This File

3 items
tsv
fragments
fragments
Harinder Singh, University of Pittsburgh
1.8 GB
validated
hdf5
raw feature barcode matrix
cell by gene expression in raw feature barcode matrix
Harinder Singh, University of Pittsburgh
393 MB
validated
csv
barcode to element mapping
barcode to element mapping
Harinder Singh, University of Pittsburgh
17 MB
validated