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INDEXED
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SequenceFile
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IGVFFI2981AKBX
IGVFFI2981AKBX
released
validated
Json view
File Set
IGVFDS3343IRTP
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8728
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8728_R1
md5sum
f1b95725db90270d71e5b9542b59892f
Content MD5sum
6e3bbc3952bd5a94d394dc3b184a5595
File Size
2.1 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2270_L4_SS-PKR-171_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8728
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
43979
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3115GZZM
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 171)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8980GLIF
yaml
seqspec
seqspec of IGVFFI2981AKBX, IGVFFI1498CUSN, IGVFFI6831LCBU
Jason Buenrostro, Broad
1.3 KB
validated