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INDEXED
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SequenceFile
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IGVFFI2978XIXL
IGVFFI2978XIXL
released
validated
Json view
File Set
IGVFDS7067AOZJ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8516
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8516_R1
md5sum
434a375ce829b63cd82eb9ba48b56bba
Content MD5sum
ce86b57b40fac5802404b953c9220287
File Size
1.0 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2346_L1_SS-PKR-207_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8516
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
23167899
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3740EDPI
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 207)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1411EJSH
yaml
seqspec
seqspec of IGVFFI2978XIXL, IGVFFI5666IMJH, IGVFFI5036DLTP
Jason Buenrostro, Broad
1.3 KB
validated