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IGVFFI2975AWSJ

released
validated
File Set
IGVFDS8556WPGM(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 38
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2006_R1
bradley-bernstein:SS-LS_38_R1
buenrostro-bernstein:SS-LS_2006_R1
buenrostro-bernstein:SS-LS_38_R1
md5sum
a1f08e349cc5a87050abbfe0e621541d
Content MD5sum
9300b7a1780a96bdf6fd6da3fea36ca8
File Size
633 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-159_L1_SS-PKR-130_2022-APRIL-R1-PLATE2-ENTIRE-PLATE_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
38
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
22838210

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 130)

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2975AWSJ, IGVFFI6665GUBQ
Jason Buenrostro, Broad
1.2 KB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad