IGVFFI2969IZDX

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8184HHTJ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G1_P056_L003_I1

md5sum

4d7f90487e04588f29ae483cedc55889

Content MD5sum

73f2f353076fa38fe8169d7b7fd4f4a6

File Size

441 MB

Submitted File Name

Multiome_RNA_RP007_G1_L001_P056_S29_L003_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

225LGWLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

72225420

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3050FUJW

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples