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INDEXED
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SequenceFile
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IGVFFI2963ZYIB
IGVFFI2963ZYIB
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7058NUBI
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_X044_G4_P044_L008_R2
md5sum
94f61ecc305f46e129f2e35a07e39fda
Content MD5sum
8e87c5fbea524c9de97c528ce3335cff
File Size
2.9 GB
Submitted File Name
Multiome_RNA_X044_G4_L004_P044_S38_L008_R2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
222YMLLT3
Lane
8
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
90
Read Count
68615517
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1493GMEH
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment; Homo sapiens (male, 85 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples