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INDEXED
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SequenceFile
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IGVFFI2962DQIK
IGVFFI2962DQIK
released
validated
Json view
File Set
IGVFDS0726CKKN
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 2515
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2515_R2
buenrostro-bernstein:SS-LS_2515_R2
md5sum
59b340c730c7ac3ade1da368d78a913f
Content MD5sum
1b9ee9fc4d84123e64bb3094d5fd96d0
File Size
769 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-87_L3_SS-PKR-8_SS-V1-2nd-THIRD_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2515
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
17043008
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8386QKSO
PrimaryCell
bone marrow
Homo sapiens (female, 19 years) bone marrow cell (cellular sub pool: SS-PKR 8)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated