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IGVFFI2941MMCJ

released
validated
File Set
IGVFDS4128FOHH(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-APC-SHARE-02-more1-ATAC.R1.fastq.gz
md5sum
fd8526c23629eca2626a1ee70b7ff0e5
Content MD5sum
1f79918f146eee4ea59fc5d197123866
File Size
6.7 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/APC-SHARE-02-more1-ATAC.R1.fastq.gz
Checkfiles Version
v14
Submitter Comment
APC-SHARE-02-30k-1_P1.80
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
86.25
Read Count
149335710

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6J colon tissue

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
4.0 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2941MMCJ, IGVFFI9334WAOR, IGVFFI7197NSEL
Jason Buenrostro, Broad
1.2 KB
validated