Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Resources
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI2941MMCJ
IGVFFI2941MMCJ
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS4128FOHH
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-APC-SHARE-02-more1-ATAC.R1.fastq.gz
md5sum
fd8526c23629eca2626a1ee70b7ff0e5
Content MD5sum
1f79918f146eee4ea59fc5d197123866
File Size
6.7 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/APC-SHARE-02-more1-ATAC.R1.fastq.gz
Checkfiles Version
v14
Submitter Comment
APC-SHARE-02-30k-1_P1.80
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
86.25
Read Count
149335710
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6844DNNZ
Tissue
colon
colon tissue, Mus musculus C57BL/6J
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad