Home

IGVFFI2940UDMA

released
validated
File Set
IGVFDS4031BSGU(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
md5sum
e3032740ef0d720818f582027f8e43ab
Content MD5sum
c3e9f50729ef83acd3bc23a181e706c3
File Size
22 GB
Submitted File Name
igvf_004/nextseq2/igvf_004_B02_E_next_N2_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AAC3V7HHV
Sequencing Kit
NextSeq 1000/2000 P3 Reagent Kit
Illumina Read Type
R1
Average Read Length
140
Read Count
277144038

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus CAST/EiJ (male, 69 days) liver tissue; Mus musculus 129S1J (female, 72 days) heart tissue; ... and 126 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
150 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2940UDMA, IGVFFI2012WHAP
Ali Mortazavi, UCI
1.3 KB
validated