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SequenceFile
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IGVFFI2930BMLU
IGVFFI2930BMLU
released
validated
Json view
File Set
IGVFDS0506MOGA
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8880
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8880_R1
md5sum
7468b6e0ff438b7f02a5895b52b1a6a2
Content MD5sum
8c3510cedecc13d47505679bca391029
File Size
860 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2326_L5_SS-PKR-188_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8880
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
19260964
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1023FJHJ
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 188)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2314XMAY
yaml
seqspec
seqspec of IGVFFI2930BMLU, IGVFFI9628MBWX, IGVFFI0397JWAG
Jason Buenrostro, Broad
1.3 KB
validated