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IGVFFI2923BFPO

released
validated
File Set
IGVFDS2071POUF(lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_exp16_multi_10x1_NGS2_r1
md5sum
85bef1a5492934851da882594dfd2feb
Content MD5sum
24234a6f51ecc7a96c1175783367d74a
File Size
147 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L004_R1_001.fastq.gz
Checkfiles Version
v14
Attribution
Ansuman Satpathy, Stanford

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
22NCFCLT3
Lane
4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
28
Read Count
6913341

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (mixed sex) induced pluripotent stem differentiated cell specimen induced to islet of Langerhans for 11 days; Homo sapiens (mixed sex) induced pluripotent stem differentiated cell specimen induced to islet of Langerhans for 3 days; ... and 6 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
cell hashing barcodes
cell hashing barcodes
Ansuman Satpathy, Stanford
523 KB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2923BFPO, IGVFFI4398NYVW, IGVFFI1877XMIT, IGVFFI1390KROG
Ansuman Satpathy, Stanford
1.3 KB
validated