IGVFFI2913MFAY

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0599HJZM(single-nucleus ATAC-seq (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_X056_G5_P073_L002_R2

md5sum

ab737011b4fd1568073dea0e8ddaf0a3

Content MD5sum

ff9fde1c735e9f71834a445d6e2d1aef

File Size

3.0 GB

Submitted File Name

Multiome_ATAC_X056_G5_L005_P073_S13_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19NHCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

174396883

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2277IYGW

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 80 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 79 years) cerebellar cortex tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 8 more samples