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IGVFFI2900LVQZ

released
validated
File Set
IGVFDS1677SYVP(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2606
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2606_R1
buenrostro-bernstein:SS-LS_2606_R1
md5sum
31a4a515dcf4f792d21979cf315f2097
Content MD5sum
6c56adb434a648970ffb0ab4c59927a3
File Size
244 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-82_L4_SS-PKR-7_SS-V2-PLATE2-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2606
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
12068089

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (29 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad