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IGVFFI2900KLVY

released
validated
File Set
IGVFDS8310XEDQ(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 6
File Format
fastq
Content Type
reads
md5sum
40ddce88bb8dc3104c02f6f3d6c0e3bc
Content MD5sum
558e1f714c84378dbb2acdc6ae11d93d
File Size
12 GB
Submitted File Name
igvf_007/nova2/igvf_007_B13_D_nova_N2_L002_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
6
Flowcell ID
HWHTCDSX5
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
178471396

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 254 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.7 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2900KLVY, IGVFFI8190HXEA
Ali Mortazavi, UCI
1.4 KB
validated