IGVFFI2897OIEW

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4046FPTG(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP029_G8_P078_L007_R1

md5sum

fd9f9dee48e920492379391585db2d16

Content MD5sum

8e9e5f5abc44a5ee01ac446fee2b7c63

File Size

16 GB

Submitted File Name

Multiome_RNA_RP029_G8_L008_P078_S72_L007_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

173059118

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9143IXZW

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) posterior cingulate gyrus tissue; ... and 6 more samples