Home

IGVFFI2895BMRV

released
validated
File Set
IGVFDS1267CSNQ(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1582
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1582_R1
buenrostro-bernstein:SS-LS_1582_R1
md5sum
e7ef4b1569a18af44476dc4e4f1acbd7
Content MD5sum
5c0117ddf2c7b96ecda9ba5d09792f1f
File Size
884 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1079_L3_SS-PKR-2_SS-V1-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1582
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
42884147

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), female, Homo sapiens (19 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad