IGVFFI2891EOZZ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0040WTQJ(single-nucleus ATAC-seq (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_X048_G4_P049_L001_R1

md5sum

9323d021ad3db1a40c462a0d96a603d7

Content MD5sum

a64eb317043a6de3e2d6a6d802ff0a27

File Size

6.2 GB

Submitted File Name

Multiome_ATAC_X048_G4_L004_P049_S8_L001_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H7VW3DSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

188915911

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4516HJDD

MultiplexedSample

posterior cingulate gyrus, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 93 years) substantia nigra tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples