IGVFFI2881MOGO

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4610DVCB(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP014_G1_P062_L006_I1

md5sum

4ac3f5fb2421ca82805a18073aeb860c

Content MD5sum

4cfbf53c22dba717d18b5535eab101cb

File Size

430 MB

Submitted File Name

Multiome_RNA_RP014_G1_L001_P062_S29_L006_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

62577010

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3192MEUT

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples