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INDEXED
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SequenceFile
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IGVFFI2874QLUX
IGVFFI2874QLUX
released
validated
Json view
File Set
IGVFDS4174PVSF
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8379
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8379_R1
md5sum
6b08af904fff29618924dc6a2dafb1bc
Content MD5sum
a4857a08e274e5f4a55d3f384a011d29
File Size
3.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2249_L5_SS-PKR-602_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8379
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
95624281
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1137TONP
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 602)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3468IMGQ
yaml
seqspec
seqspec of IGVFFI2874QLUX, IGVFFI6916HPCW
Jason Buenrostro, Broad
1.3 KB
validated