Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI2851QCAV
IGVFFI2851QCAV
released
validated
Json view
File Set
IGVFDS8366JHMT
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 2597
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2597_R2
buenrostro-bernstein:SS-LS_2597_R2
md5sum
d66c55508b3f320cd9b5a22f3d093ac9
Content MD5sum
05f60982e029d21b96261d1d297c98da
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-73_L4_SS-PKR-7_SS-V1-1st-THIRD_R2.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2597
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
23901422
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1533LKGV
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (26 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad