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INDEXED
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SequenceFile
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IGVFFI2849QDFE
IGVFFI2849QDFE
released
validated
Json view
File Set
IGVFDS7635GZJI
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8957
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8957_R1
md5sum
6a69ea0257fbc2af76be0e35c7d62114
Content MD5sum
11541bb11ae7acd430391cdcbaa245fa
File Size
632 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2307_L6_SS-PKR-182_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8957
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
14005085
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2051NVYB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 182)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3520PLMK
yaml
seqspec
seqspec of IGVFFI2849QDFE, IGVFFI9636FXUR, IGVFFI2905SYNA
Jason Buenrostro, Broad
1.3 KB
validated