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SequenceFile
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IGVFFI2845PDJF
IGVFFI2845PDJF
released
validated
Json view
File Set
IGVFDS8248GGOY
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 256
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2071_R1
bradley-bernstein:SS-LS_256_R1
buenrostro-bernstein:SS-LS_2071_R1
buenrostro-bernstein:SS-LS_256_R1
md5sum
a2b4bf5cceb32d6d42b8806012aba392
Content MD5sum
6b19072ed549cad993d07759599ca414
File Size
538 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-200_L1_SS-PKR-131_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
256
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
16550461
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9781HISX
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0182TGVL
yaml
seqspec
seqspec of IGVFFI2845PDJF, IGVFFI3616NUWL
Jason Buenrostro, Broad
1.2 KB
validated