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IGVFFI2837KHGX

released
validated
File Set
IGVFDS6138PRFG(lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_exp11_multi_10x4_NGS1_i1
md5sum
95c9e686e5cff01b1d01ae0a790dc1df
Content MD5sum
cadc042d71556beea263f6ebe069e5b1
File Size
802 MB
Submitted File Name
/oak/stanford/projects/igvf/Projects/240424_IGVF11_McGinnis/MULTI/FASTQ/MULTI4_S29_L003_I1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ansuman Satpathy, Stanford

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
HGVFMDSX7
Lane
3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
I1
Average Read Length
10
Read Count
88454448

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female) H7-hESC differentiated cell specimen; Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 6 days; ... and 10 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
cell hashing barcodes
cell hashing barcodes
Ansuman Satpathy, Stanford
231 KB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2963SHFI, IGVFFI5726YOUZ, IGVFFI2837KHGX, IGVFFI5340XWGU
Ansuman Satpathy, Stanford
1.3 KB
validated