IGVFFI2828ICDH

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1448IDZP(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X035_G7_P036_L004_I2

md5sum

f435f190bb90f201747d6236fe234544

Content MD5sum

5d4a6ae5efa1f974459169c88b2ae144

File Size

1.6 GB

Submitted File Name

Multiome_RNA_X035_G7_L007_P036_S53_L004_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H2WFTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

225505399

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2603ZBHC

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) substantia nigra tissue; Homo sapiens (female, 84 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples